Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874794.1_cds_XP_016435624.1_31564
CDS Infomation

[gene=LOC107761850] [db_xref=GeneID:107761850] [protein=protein CPR-5-like] [protein_id=XP_016435624.1] [location=complement(join(73459..73998,74765..75520,75639..75674,75936..75992,78738..79106))] [gbkey=CDS]
Sequence

ATGGACCACCACCACCCCCCTCTATCTCAACCCGTGGATCCACCGCCGGAGCCAACCTCC
GACACCATGGCTACGGAAATCCCACCGGAATCTTCAGTCTCCGGCGGCGTTATGAAGAAT
AAACCGAAGAAGAAGAAAAAGAAGAATAAATCGTGCGACAATGATCTTTTTGACCCTCAA
TCTTCTTCCGCTGCCTCCTATGCCCCATCGTCTTGTTCTACGACGTCGTTTTCTCAAAGG
GGTATTAGGGTTTCGGCAAGTCGTCGGAACCCTAGAGTGGTAATTGGGGCCGGCAGGCAG
AAAAGTGATGAGAATGTTGAAGCCCTTGCTCTCCCTCTTGGCATGTCTATTGCTGCTGTT
CTTGCTCAGGTTTTGGAAAGGAAAGATGCGGCTGGAGAAAAGATATCGGTGGATCACCTC
TCAGAGATTTGTACTTTAGCTGTCCGAGAGTCTTTGGCCAATGTCTTCGGTGACCAGTTT
GAGTCTTTCGTGAGGAACTTTGAGAAATCATTTCGTAGTACCCTGATGACTCTCAGATTA
ATCAATGAATCCTCTATGAATAATGGAGAACAGAAAAATTGTTGTGCAGCGAAGACTTCT
GTCTCAGAAAGATCTGTGCCTTTGATTTCCAACAGACTAGAAAATCTTACATGTGATCCT
GACTTCAGCGAGTTTCAATCGGAGTCATGTCAGCAGAGTGCCATATCAGATAACGAACTG
AGTAATCAAGAAGAAAGAAGTGATGGTACATGTCTTGAATCGATAGGTCGGCAGCTTACC
CTCTATGATAGGCAAGGAAGGCAGCAATTGGCTTCTGTTTCTTCAAGCATGATTTCATCC
AGTACAGAAATTAATCGATCTGTGAGTAGCACTTTGGAAAGATCTGTCATGGAGCAAGCT
AGGTCGAATGACCTCAAGACATTTGAGATTGGTCTTACAATGAGGAAATTGCAACTTAAA
GAAAGGCAGCTGGCTCTCAGTTCTGATGCGAACCTTTTGGAGAGGGTCAAACTTTCTTTT
GGTTTCTCTAAGACGTCCTTCAAAGCCGAAAAGTTTAAAAATCAAGTAGAAGACTCAAAA
CATACTGAGATGCTTAAAACATGTTTAGACTGCCTTGTTGCTGGTTTATTTATCATGCTG
GTGTGTCTTGGATACGGAACTTATGTTTTCTCTCACAAAAGAATAACTGAAGCTACAGCA
TCCTGCACACCTGTCATGGAGTACAAGTCGTCCTGGTGGATGCCCAAATCAATGTCAACT
TTCAATTCAGGACTGCAATTCTTGCGGTGTCAGGTTCAAGTTCTCAGTCGTATGCTATTT
GGTGCTATCCTGATATTGGCTATAGCCTATTTACTTCTCCAACGCTCAGCAACTTCAAAC
CAGACGATGCCAGTTACTTTCATTCTGTTGCTGTTGGGAGTTGGCTGCGGTTTTGCAGGG
AAGTTTTGTATCGACACCCTGGGGGGCAGCGGATATCATTGGTTAATTTATTGGGAGACT
TTGTGCTTGCTGCATTTCTTTTCGAATGTCTGTATCTCAACTTTGTTACTGATCCTTAAT
GGGCCTGTCACGGTGTCAGAAAAGAGCACGAGGGATACAAGATTTCCATACTGGATGAGG
AGATCTGTGTTCTATACCACATTACTTCTTTTCCTCCCGTTGTTATGTGGTCTGATGCCT
TTTGCTGGCCCTGGTGAGTGGAAGGATCACTTTTCTTCACTGGTTCTGGACGCTTTTATA
ACTCCAGTTGAATACTAA

Peptide Sequence

PEP ID

XP_016435624.1
PEP Infomation

PREDICTED: protein CPR-5-like [Nicotiana tabacum]
Sequence

MDHHHPPLSQPVDPPPEPTSDTMATEIPPESSVSGGVMKNKPKKKKKKNKSCDNDLFDPQ
SSSAASYAPSSCSTTSFSQRGIRVSASRRNPRVVIGAGRQKSDENVEALALPLGMSIAAV
LAQVLERKDAAGEKISVDHLSEICTLAVRESLANVFGDQFESFVRNFEKSFRSTLMTLRL
INESSMNNGEQKNCCAAKTSVSERSVPLISNRLENLTCDPDFSEFQSESCQQSAISDNEL
SNQEERSDGTCLESIGRQLTLYDRQGRQQLASVSSSMISSSTEINRSVSSTLERSVMEQA
RSNDLKTFEIGLTMRKLQLKERQLALSSDANLLERVKLSFGFSKTSFKAEKFKNQVEDSK
HTEMLKTCLDCLVAGLFIMLVCLGYGTYVFSHKRITEATASCTPVMEYKSSWWMPKSMST
FNSGLQFLRCQVQVLSRMLFGAILILAIAYLLLQRSATSNQTMPVTFILLLLGVGCGFAG
KFCIDTLGGSGYHWLIYWETLCLLHFFSNVCISTLLLILNGPVTVSEKSTRDTRFPYWMR
RSVFYTTLLLFLPLLCGLMPFAGPGEWKDHFSSLVLDAFITPVEY

Transcript Sequence

Gene sequence data has not been registered.